Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trpa1Q8BLA8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trpa1Q8BLA8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trpa1Q8BLA8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trpa1Q8BLA8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Trpa1Q8BLA8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.1■□□□□ 0.33
Trpa1Q8BLA8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trpa1Q8BLA8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trpa1Q8BLA8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.1■□□□□ 0.33
Trpa1Q8BLA8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.1■□□□□ 0.33
Trpa1Q8BLA8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trpa1Q8BLA8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trpa1Q8BLA8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trpa1Q8BLA8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Gm11950-201ENSMUST00000121615 838 ntBASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trpa1Q8BLA8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trpa1Q8BLA8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trpa1Q8BLA8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trpa1Q8BLA8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trpa1Q8BLA8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trpa1Q8BLA8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trpa1Q8BLA8 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.08■□□□□ 0.32
Trpa1Q8BLA8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Trpa1Q8BLA8 Gm7284-201ENSMUST00000131667 944 ntBASIC17.08■□□□□ 0.32
Trpa1Q8BLA8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trpa1Q8BLA8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trpa1Q8BLA8 Gm7367-201ENSMUST00000057611 492 ntBASIC17.08■□□□□ 0.32
Trpa1Q8BLA8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trpa1Q8BLA8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trpa1Q8BLA8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trpa1Q8BLA8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trpa1Q8BLA8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.08■□□□□ 0.32
Trpa1Q8BLA8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trpa1Q8BLA8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Gm13216-201ENSMUST00000117145 591 ntBASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trpa1Q8BLA8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms