Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clrn3Q8BHH8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clrn3Q8BHH8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clrn3Q8BHH8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clrn3Q8BHH8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Clrn3Q8BHH8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Clrn3Q8BHH8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Gm11336-201ENSMUST00000118168 334 ntBASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Mir7071-201ENSMUST00000184847 69 ntBASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn3Q8BHH8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Gm11355-201ENSMUST00000121120 306 ntBASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Gm29707-201ENSMUST00000196325 491 ntBASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Gm44450-201ENSMUST00000199528 114 ntBASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Gm10566-201ENSMUST00000086739 996 ntBASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn3Q8BHH8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn3Q8BHH8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms