Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Usp8Q80U87 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp8Q80U87 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp8Q80U87 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.33■□□□□ 0.2
Usp8Q80U87 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp8Q80U87 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Usp8Q80U87 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Usp8Q80U87 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Usp8Q80U87 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp8Q80U87 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp8Q80U87 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp8Q80U87 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Usp8Q80U87 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Usp8Q80U87 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.32■□□□□ 0.2
Usp8Q80U87 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp8Q80U87 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Gm5417-201ENSMUST00000079706 384 ntBASIC16.32■□□□□ 0.2
Usp8Q80U87 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp8Q80U87 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Usp8Q80U87 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp8Q80U87 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Usp8Q80U87 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Usp8Q80U87 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.31■□□□□ 0.2
Usp8Q80U87 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Usp8Q80U87 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Usp8Q80U87 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.31■□□□□ 0.2
Usp8Q80U87 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp8Q80U87 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Usp8Q80U87 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.3■□□□□ 0.2
Usp8Q80U87 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp8Q80U87 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp8Q80U87 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Usp8Q80U87 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp8Q80U87 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp8Q80U87 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp8Q80U87 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.3■□□□□ 0.2
Usp8Q80U87 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp8Q80U87 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Usp8Q80U87 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp8Q80U87 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms