Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Cspg5Q71M36 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.82■□□□□ 0.28
Cspg5Q71M36 Mir5131-201ENSMUST00000175426 93 ntBASIC16.82■□□□□ 0.28
Cspg5Q71M36 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Gm27867-201ENSMUST00000184778 125 ntBASIC16.82■□□□□ 0.28
Cspg5Q71M36 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Haglr-201ENSMUST00000100000 2085 ntBASIC16.81■□□□□ 0.28
Cspg5Q71M36 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg5Q71M36 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.81■□□□□ 0.28
Cspg5Q71M36 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.81■□□□□ 0.28
Cspg5Q71M36 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.81■□□□□ 0.28
Cspg5Q71M36 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.81■□□□□ 0.28
Cspg5Q71M36 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg5Q71M36 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Gm37935-201ENSMUST00000192012 982 ntBASIC16.8■□□□□ 0.28
Cspg5Q71M36 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg5Q71M36 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.8■□□□□ 0.28
Cspg5Q71M36 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Cspg5Q71M36 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Gm6376-201ENSMUST00000209407 580 ntBASIC16.79■□□□□ 0.28
Cspg5Q71M36 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.79■□□□□ 0.28
Cspg5Q71M36 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.79■□□□□ 0.28
Cspg5Q71M36 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg5Q71M36 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.78■□□□□ 0.28
Cspg5Q71M36 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Gm13186-201ENSMUST00000118031 316 ntBASIC16.78■□□□□ 0.28
Cspg5Q71M36 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.78■□□□□ 0.28
Cspg5Q71M36 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg5Q71M36 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms