Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 Gm44492-201ENSMUST00000197012 141 ntBASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 Gm7787-201ENSMUST00000216858 688 ntBASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.19■□□□□ 0.66
Nup188Q6ZQH8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nup188Q6ZQH8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Gm11025-201ENSMUST00000140773 466 ntBASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nup188Q6ZQH8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Gm15427-201ENSMUST00000117288 531 ntBASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Gm43125-201ENSMUST00000201724 730 ntBASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Gm15358-201ENSMUST00000119249 520 ntBASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nup188Q6ZQH8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup188Q6ZQH8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nup188Q6ZQH8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup188Q6ZQH8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup188Q6ZQH8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup188Q6ZQH8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nup188Q6ZQH8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup188Q6ZQH8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nup188Q6ZQH8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup188Q6ZQH8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nup188Q6ZQH8 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.15■□□□□ 0.66
Nup188Q6ZQH8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nup188Q6ZQH8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nup188Q6ZQH8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.15■□□□□ 0.66
Nup188Q6ZQH8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Nup188Q6ZQH8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nup188Q6ZQH8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Nup188Q6ZQH8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nup188Q6ZQH8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nup188Q6ZQH8 AA543401-201ENSMUST00000164248 1269 ntBASIC19.14■□□□□ 0.66
Nup188Q6ZQH8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Nup188Q6ZQH8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms