Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ddx55Q6ZPL9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx55Q6ZPL9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx55Q6ZPL9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ddx55Q6ZPL9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Ddx55Q6ZPL9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ddx55Q6ZPL9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ddx55Q6ZPL9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx55Q6ZPL9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx55Q6ZPL9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx55Q6ZPL9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms