Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Gm18958-201ENSMUST00000174258 762 ntBASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casc1Q6TDU8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casc1Q6TDU8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Casc1Q6TDU8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC19.39■□□□□ 0.7
Casc1Q6TDU8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Casc1Q6TDU8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Casc1Q6TDU8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Casc1Q6TDU8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Gm10013-201ENSMUST00000106074 672 ntBASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Gm22697-201ENSMUST00000175194 63 ntBASIC19.39■□□□□ 0.69
Casc1Q6TDU8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Gm18101-201ENSMUST00000215769 548 ntBASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc1Q6TDU8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Gm7213-201ENSMUST00000215977 950 ntBASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms