Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 Gm2651-201ENSMUST00000203560 838 ntBASIC20.05■□□□□ 0.8
Ddx58Q6Q899 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.05■□□□□ 0.8
Ddx58Q6Q899 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx58Q6Q899 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Gm13418-201ENSMUST00000119097 944 ntBASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Gm10060-201ENSMUST00000212002 111 ntBASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ddx58Q6Q899 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Gm25990-201ENSMUST00000102440 86 ntBASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Gm8097-201ENSMUST00000117903 829 ntBASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Gm6443-201ENSMUST00000203599 874 ntBASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx58Q6Q899 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Gm8655-201ENSMUST00000221159 852 ntBASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx58Q6Q899 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.02■□□□□ 0.79
Ddx58Q6Q899 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx58Q6Q899 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx58Q6Q899 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx58Q6Q899 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx58Q6Q899 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx58Q6Q899 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx58Q6Q899 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx58Q6Q899 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx58Q6Q899 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx58Q6Q899 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.01■□□□□ 0.79
Ddx58Q6Q899 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.01■□□□□ 0.79
Ddx58Q6Q899 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx58Q6Q899 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx58Q6Q899 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.01■□□□□ 0.79
Ddx58Q6Q899 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx58Q6Q899 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx58Q6Q899 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms