Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Gm13597-201ENSMUST00000121239 375 ntBASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Gm9682-201ENSMUST00000197505 556 ntBASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.03■□□□□ 0.64
Nup98Q6PFD9 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup98Q6PFD9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nup98Q6PFD9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nup98Q6PFD9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Nup98Q6PFD9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nup98Q6PFD9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.02■□□□□ 0.64
Nup98Q6PFD9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Nup98Q6PFD9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nup98Q6PFD9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.63
Nup98Q6PFD9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.02■□□□□ 0.63
Nup98Q6PFD9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nup98Q6PFD9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.02■□□□□ 0.63
Nup98Q6PFD9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.02■□□□□ 0.63
Nup98Q6PFD9 Gm37153-201ENSMUST00000193637 231 ntBASIC19.02■□□□□ 0.63
Nup98Q6PFD9 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.02■□□□□ 0.63
Nup98Q6PFD9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nup98Q6PFD9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nup98Q6PFD9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nup98Q6PFD9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nup98Q6PFD9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nup98Q6PFD9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19■□□□□ 0.63
Nup98Q6PFD9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Nup98Q6PFD9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19■□□□□ 0.63
Nup98Q6PFD9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19■□□□□ 0.63
Nup98Q6PFD9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Nup98Q6PFD9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19■□□□□ 0.63
Nup98Q6PFD9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Gm27300-201ENSMUST00000184085 97 ntBASIC19■□□□□ 0.63
Nup98Q6PFD9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19■□□□□ 0.63
Nup98Q6PFD9 Gm27335-201ENSMUST00000184758 97 ntBASIC19■□□□□ 0.63
Nup98Q6PFD9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19■□□□□ 0.63
Nup98Q6PFD9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19■□□□□ 0.63
Nup98Q6PFD9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Nup98Q6PFD9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19■□□□□ 0.63
Nup98Q6PFD9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nup98Q6PFD9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nup98Q6PFD9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nup98Q6PFD9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup98Q6PFD9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup98Q6PFD9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup98Q6PFD9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup98Q6PFD9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Nup98Q6PFD9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms