Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Dhx40Q6PE54 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Gm36967-201ENSMUST00000193814 266 ntBASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Odf3b-204ENSMUST00000227834 930 ntBASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dhx40Q6PE54 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dhx40Q6PE54 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Gm37055-201ENSMUST00000191866 133 ntBASIC18.04■□□□□ 0.48
Dhx40Q6PE54 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Dhx40Q6PE54 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms