Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Gm11764-201ENSMUST00000120221 623 ntBASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Gm18622-201ENSMUST00000219361 595 ntBASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Gm27646-201ENSMUST00000183989 110 ntBASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Snrnp40Q6PE01 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Gm15920-201ENSMUST00000118998 402 ntBASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Chchd1-203ENSMUST00000224633 557 ntBASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.23□□□□□ -0.13
Snrnp40Q6PE01 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Gm5682-201ENSMUST00000173402 505 ntBASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.22□□□□□ -0.13
Snrnp40Q6PE01 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms