Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC24.93■■□□□ 1.58
Slx4Q6P1D7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Slx4Q6P1D7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Slx4Q6P1D7 Gm9682-201ENSMUST00000197505 556 ntBASIC24.93■■□□□ 1.58
Slx4Q6P1D7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Slx4Q6P1D7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Slx4Q6P1D7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Slx4Q6P1D7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC24.92■■□□□ 1.58
Slx4Q6P1D7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Slx4Q6P1D7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC24.92■■□□□ 1.58
Slx4Q6P1D7 Gm11185-201ENSMUST00000117732 1007 ntBASIC24.92■■□□□ 1.58
Slx4Q6P1D7 Gm20949-201ENSMUST00000206478 952 ntBASIC24.92■■□□□ 1.58
Slx4Q6P1D7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Slx4Q6P1D7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Slx4Q6P1D7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Slx4Q6P1D7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Slx4Q6P1D7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Slx4Q6P1D7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Slx4Q6P1D7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Slx4Q6P1D7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Slx4Q6P1D7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Slx4Q6P1D7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Slx4Q6P1D7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
Slx4Q6P1D7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Slx4Q6P1D7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Slx4Q6P1D7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Slx4Q6P1D7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Slx4Q6P1D7 Gm36858-201ENSMUST00000194501 2391 ntBASIC24.9■■□□□ 1.58
Slx4Q6P1D7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Slx4Q6P1D7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Slx4Q6P1D7 Gm8344-201ENSMUST00000119813 856 ntBASIC24.9■■□□□ 1.58
Slx4Q6P1D7 Gm11745-201ENSMUST00000121669 448 ntBASIC24.9■■□□□ 1.58
Slx4Q6P1D7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Slx4Q6P1D7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC24.9■■□□□ 1.58
Slx4Q6P1D7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Slx4Q6P1D7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Slx4Q6P1D7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC24.89■■□□□ 1.58
Slx4Q6P1D7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC24.89■■□□□ 1.58
Slx4Q6P1D7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC24.89■■□□□ 1.58
Slx4Q6P1D7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Slx4Q6P1D7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Slx4Q6P1D7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
Slx4Q6P1D7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Slx4Q6P1D7 Gm16401-202ENSMUST00000197463 2074 ntBASIC24.89■■□□□ 1.57
Slx4Q6P1D7 Gm4609-201ENSMUST00000106443 1002 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm5138-201ENSMUST00000113842 1002 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm15191-201ENSMUST00000117933 1000 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm12182-201ENSMUST00000118655 1008 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm13882-201ENSMUST00000120886 1002 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm10284-201ENSMUST00000145057 1005 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm10481-201ENSMUST00000179228 1002 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm2574-201ENSMUST00000181051 1002 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm3200-201ENSMUST00000181493 1002 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm4518-201ENSMUST00000182638 718 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm8330-201ENSMUST00000182754 1008 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm4575-201ENSMUST00000182991 1002 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm8709-201ENSMUST00000183230 1012 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm10293-201ENSMUST00000076317 1002 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm6316-201ENSMUST00000082064 1020 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Mir7023-201ENSMUST00000185093 64 ntBASIC24.88■■□□□ 1.57
Slx4Q6P1D7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Slx4Q6P1D7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC24.87■■□□□ 1.57
Slx4Q6P1D7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
Slx4Q6P1D7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Slx4Q6P1D7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Slx4Q6P1D7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Slx4Q6P1D7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Slx4Q6P1D7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Slx4Q6P1D7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Slx4Q6P1D7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC24.87■■□□□ 1.57
Slx4Q6P1D7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Slx4Q6P1D7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC24.86■■□□□ 1.57
Slx4Q6P1D7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Slx4Q6P1D7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Slx4Q6P1D7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Slx4Q6P1D7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Slx4Q6P1D7 Gm13216-201ENSMUST00000117145 591 ntBASIC24.86■■□□□ 1.57
Slx4Q6P1D7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC24.86■■□□□ 1.57
Slx4Q6P1D7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Slx4Q6P1D7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC24.86■■□□□ 1.57
Slx4Q6P1D7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Slx4Q6P1D7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Slx4Q6P1D7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC24.86■■□□□ 1.57
Slx4Q6P1D7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Slx4Q6P1D7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Slx4Q6P1D7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Slx4Q6P1D7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
Slx4Q6P1D7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC24.85■■□□□ 1.57
Slx4Q6P1D7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC24.85■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms