Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac4Q6NZM9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac4Q6NZM9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac4Q6NZM9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac4Q6NZM9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac4Q6NZM9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac4Q6NZM9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac4Q6NZM9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac4Q6NZM9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac4Q6NZM9 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.2■□□□□ 0.5
Hdac4Q6NZM9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac4Q6NZM9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Hdac4Q6NZM9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac4Q6NZM9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac4Q6NZM9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac4Q6NZM9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Gm6623-201ENSMUST00000173570 544 ntBASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Dancr-204ENSMUST00000132389 2347 ntBASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac4Q6NZM9 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac4Q6NZM9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac4Q6NZM9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac4Q6NZM9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac4Q6NZM9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac4Q6NZM9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac4Q6NZM9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.16■□□□□ 0.5
Hdac4Q6NZM9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac4Q6NZM9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hdac4Q6NZM9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac4Q6NZM9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac4Q6NZM9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac4Q6NZM9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac4Q6NZM9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hdac4Q6NZM9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac4Q6NZM9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Gm13836-201ENSMUST00000121159 501 ntBASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Gm6659-201ENSMUST00000174752 547 ntBASIC18.15■□□□□ 0.5
Hdac4Q6NZM9 Gm23634-201ENSMUST00000175071 91 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms