Protein–RNA interactions for Protein: Q68FE2

Atg9a, Autophagy-related protein 9A, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg9aQ68FE2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atg9aQ68FE2 Gm25990-201ENSMUST00000102440 86 ntBASIC19.48■□□□□ 0.71
Atg9aQ68FE2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.48■□□□□ 0.71
Atg9aQ68FE2 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.48■□□□□ 0.71
Atg9aQ68FE2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Atg9aQ68FE2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atg9aQ68FE2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atg9aQ68FE2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Atg9aQ68FE2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atg9aQ68FE2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Atg9aQ68FE2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atg9aQ68FE2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atg9aQ68FE2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.47■□□□□ 0.71
Atg9aQ68FE2 Gm8655-201ENSMUST00000221159 852 ntBASIC19.47■□□□□ 0.71
Atg9aQ68FE2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg9aQ68FE2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg9aQ68FE2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg9aQ68FE2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Atg9aQ68FE2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg9aQ68FE2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Atg9aQ68FE2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg9aQ68FE2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg9aQ68FE2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Atg9aQ68FE2 Gm10060-201ENSMUST00000212002 111 ntBASIC19.45■□□□□ 0.7
Atg9aQ68FE2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg9aQ68FE2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Atg9aQ68FE2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Atg9aQ68FE2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg9aQ68FE2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Gm18195-201ENSMUST00000207604 706 ntBASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.44■□□□□ 0.7
Atg9aQ68FE2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Atg9aQ68FE2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg9aQ68FE2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg9aQ68FE2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atg9aQ68FE2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Atg9aQ68FE2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.43■□□□□ 0.7
Atg9aQ68FE2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Atg9aQ68FE2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg9aQ68FE2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg9aQ68FE2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.43■□□□□ 0.7
Atg9aQ68FE2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atg9aQ68FE2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atg9aQ68FE2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Atg9aQ68FE2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg9aQ68FE2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atg9aQ68FE2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms