Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.82□□□□□ -0.52
Ndufa4Q62425 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.82□□□□□ -0.52
Ndufa4Q62425 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.82□□□□□ -0.52
Ndufa4Q62425 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa4Q62425 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Gm13158-201ENSMUST00000122007 736 ntBASIC11.81□□□□□ -0.52
Ndufa4Q62425 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.81□□□□□ -0.52
Ndufa4Q62425 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa4Q62425 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.8□□□□□ -0.52
Ndufa4Q62425 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.8□□□□□ -0.52
Ndufa4Q62425 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ndufa4Q62425 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Gm37292-201ENSMUST00000192062 758 ntBASIC11.8□□□□□ -0.52
Ndufa4Q62425 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufa4Q62425 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ndufa4Q62425 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ndufa4Q62425 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.79□□□□□ -0.52
Ndufa4Q62425 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms