Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxc1Q61572 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxc1Q61572 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Foxc1Q61572 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxc1Q61572 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxc1Q61572 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxc1Q61572 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxc1Q61572 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Foxc1Q61572 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxc1Q61572 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Foxc1Q61572 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxc1Q61572 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Foxc1Q61572 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Foxc1Q61572 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.95□□□□□ -0.5
Foxc1Q61572 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Foxc1Q61572 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.94□□□□□ -0.5
Foxc1Q61572 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.94□□□□□ -0.5
Foxc1Q61572 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.94□□□□□ -0.5
Foxc1Q61572 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Foxc1Q61572 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.94□□□□□ -0.5
Foxc1Q61572 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Foxc1Q61572 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.94□□□□□ -0.5
Foxc1Q61572 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Gm36991-201ENSMUST00000191800 648 ntBASIC11.94□□□□□ -0.5
Foxc1Q61572 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Foxc1Q61572 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.94□□□□□ -0.5
Foxc1Q61572 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.94□□□□□ -0.5
Foxc1Q61572 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Foxc1Q61572 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.94□□□□□ -0.5
Foxc1Q61572 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Foxc1Q61572 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
Foxc1Q61572 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.94□□□□□ -0.5
Foxc1Q61572 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Foxc1Q61572 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxc1Q61572 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Foxc1Q61572 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Foxc1Q61572 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.93□□□□□ -0.5
Foxc1Q61572 Gm11355-201ENSMUST00000121120 306 ntBASIC11.93□□□□□ -0.5
Foxc1Q61572 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC11.93□□□□□ -0.5
Foxc1Q61572 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.93□□□□□ -0.5
Foxc1Q61572 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.93□□□□□ -0.5
Foxc1Q61572 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Foxc1Q61572 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.93□□□□□ -0.5
Foxc1Q61572 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.93□□□□□ -0.5
Foxc1Q61572 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxc1Q61572 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.92□□□□□ -0.5
Foxc1Q61572 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.92□□□□□ -0.5
Foxc1Q61572 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.92□□□□□ -0.5
Foxc1Q61572 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxc1Q61572 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms