Protein–RNA interactions for Protein: Q61510

Trim25, E3 ubiquitin/ISG15 ligase TRIM25, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim25Q61510 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim25Q61510 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim25Q61510 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim25Q61510 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim25Q61510 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim25Q61510 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim25Q61510 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim25Q61510 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim25Q61510 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim25Q61510 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim25Q61510 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim25Q61510 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim25Q61510 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim25Q61510 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim25Q61510 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim25Q61510 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trim25Q61510 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim25Q61510 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim25Q61510 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim25Q61510 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.67■□□□□ 0.42
Trim25Q61510 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim25Q61510 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim25Q61510 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim25Q61510 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim25Q61510 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim25Q61510 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim25Q61510 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim25Q61510 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Trim25Q61510 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim25Q61510 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim25Q61510 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trim25Q61510 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Trim25Q61510 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim25Q61510 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim25Q61510 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.66■□□□□ 0.42
Trim25Q61510 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim25Q61510 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.66■□□□□ 0.42
Trim25Q61510 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim25Q61510 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim25Q61510 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim25Q61510 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim25Q61510 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim25Q61510 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim25Q61510 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim25Q61510 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim25Q61510 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim25Q61510 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim25Q61510 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim25Q61510 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim25Q61510 Gm24841-201ENSMUST00000158676 357 ntBASIC17.65■□□□□ 0.42
Trim25Q61510 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim25Q61510 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim25Q61510 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim25Q61510 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim25Q61510 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim25Q61510 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim25Q61510 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim25Q61510 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Trim25Q61510 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim25Q61510 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim25Q61510 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.64■□□□□ 0.41
Trim25Q61510 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trim25Q61510 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.64■□□□□ 0.41
Trim25Q61510 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.64■□□□□ 0.41
Trim25Q61510 Gm2559-201ENSMUST00000201323 363 ntBASIC17.64■□□□□ 0.41
Trim25Q61510 Gm5874-201ENSMUST00000096101 508 ntBASIC17.64■□□□□ 0.41
Trim25Q61510 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim25Q61510 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim25Q61510 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim25Q61510 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim25Q61510 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim25Q61510 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim25Q61510 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim25Q61510 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim25Q61510 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim25Q61510 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim25Q61510 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim25Q61510 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim25Q61510 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim25Q61510 Gm27000-201ENSMUST00000182943 842 ntBASIC17.63■□□□□ 0.41
Trim25Q61510 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim25Q61510 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim25Q61510 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim25Q61510 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim25Q61510 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim25Q61510 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms