Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Foxd1Q61345 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxd1Q61345 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Foxd1Q61345 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxd1Q61345 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.71■□□□□ 0.59
Foxd1Q61345 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxd1Q61345 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxd1Q61345 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxd1Q61345 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Foxd1Q61345 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.71■□□□□ 0.59
Foxd1Q61345 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.71■□□□□ 0.59
Foxd1Q61345 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC18.71■□□□□ 0.59
Foxd1Q61345 Gm17271-201ENSMUST00000165535 355 ntBASIC18.71■□□□□ 0.59
Foxd1Q61345 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Foxd1Q61345 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Foxd1Q61345 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.71■□□□□ 0.59
Foxd1Q61345 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.71■□□□□ 0.59
Foxd1Q61345 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Foxd1Q61345 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Foxd1Q61345 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Foxd1Q61345 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxd1Q61345 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxd1Q61345 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxd1Q61345 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.7■□□□□ 0.58
Foxd1Q61345 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.7■□□□□ 0.58
Foxd1Q61345 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Foxd1Q61345 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.7■□□□□ 0.58
Foxd1Q61345 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxd1Q61345 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxd1Q61345 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxd1Q61345 Rassf8-202ENSMUST00000058538 1131 ntBASIC18.7■□□□□ 0.58
Foxd1Q61345 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxd1Q61345 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Foxd1Q61345 Gm10355-201ENSMUST00000097146 517 ntBASIC18.7■□□□□ 0.58
Foxd1Q61345 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxd1Q61345 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxd1Q61345 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.7■□□□□ 0.58
Foxd1Q61345 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxd1Q61345 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.69■□□□□ 0.58
Foxd1Q61345 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Foxd1Q61345 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Foxd1Q61345 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.69■□□□□ 0.58
Foxd1Q61345 Gm11780-201ENSMUST00000136880 516 ntBASIC18.69■□□□□ 0.58
Foxd1Q61345 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.69■□□□□ 0.58
Foxd1Q61345 Gm27867-201ENSMUST00000184778 125 ntBASIC18.69■□□□□ 0.58
Foxd1Q61345 Gm6550-201ENSMUST00000187574 993 ntBASIC18.69■□□□□ 0.58
Foxd1Q61345 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Foxd1Q61345 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd1Q61345 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd1Q61345 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Foxd1Q61345 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd1Q61345 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd1Q61345 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd1Q61345 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd1Q61345 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.68■□□□□ 0.58
Foxd1Q61345 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.68■□□□□ 0.58
Foxd1Q61345 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Foxd1Q61345 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd1Q61345 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Foxd1Q61345 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd1Q61345 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd1Q61345 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd1Q61345 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd1Q61345 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd1Q61345 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd1Q61345 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd1Q61345 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd1Q61345 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd1Q61345 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.67■□□□□ 0.58
Foxd1Q61345 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd1Q61345 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.67■□□□□ 0.58
Foxd1Q61345 Gm13036-201ENSMUST00000117799 748 ntBASIC18.67■□□□□ 0.58
Foxd1Q61345 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd1Q61345 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.67■□□□□ 0.58
Foxd1Q61345 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Foxd1Q61345 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.67■□□□□ 0.58
Foxd1Q61345 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.67■□□□□ 0.58
Foxd1Q61345 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd1Q61345 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Foxd1Q61345 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd1Q61345 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd1Q61345 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms