Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clns1aQ61189 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clns1aQ61189 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.96□□□□□ -0.17
Clns1aQ61189 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clns1aQ61189 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clns1aQ61189 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clns1aQ61189 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clns1aQ61189 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clns1aQ61189 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Clns1aQ61189 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clns1aQ61189 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clns1aQ61189 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Clns1aQ61189 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clns1aQ61189 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.95□□□□□ -0.18
Clns1aQ61189 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Clns1aQ61189 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clns1aQ61189 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clns1aQ61189 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Clns1aQ61189 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clns1aQ61189 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Clns1aQ61189 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Clns1aQ61189 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clns1aQ61189 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clns1aQ61189 Gm2559-201ENSMUST00000201323 363 ntBASIC13.95□□□□□ -0.18
Clns1aQ61189 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clns1aQ61189 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clns1aQ61189 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clns1aQ61189 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.95□□□□□ -0.18
Clns1aQ61189 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clns1aQ61189 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.95□□□□□ -0.18
Clns1aQ61189 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clns1aQ61189 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Clns1aQ61189 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.95□□□□□ -0.18
Clns1aQ61189 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Clns1aQ61189 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Clns1aQ61189 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.94□□□□□ -0.18
Clns1aQ61189 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Clns1aQ61189 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.94□□□□□ -0.18
Clns1aQ61189 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.94□□□□□ -0.18
Clns1aQ61189 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Clns1aQ61189 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Clns1aQ61189 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clns1aQ61189 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Clns1aQ61189 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Clns1aQ61189 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.93□□□□□ -0.18
Clns1aQ61189 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Gm13148-201ENSMUST00000118892 745 ntBASIC13.93□□□□□ -0.18
Clns1aQ61189 Gm24841-201ENSMUST00000158676 357 ntBASIC13.93□□□□□ -0.18
Clns1aQ61189 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.93□□□□□ -0.18
Clns1aQ61189 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.93□□□□□ -0.18
Clns1aQ61189 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Clns1aQ61189 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clns1aQ61189 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.92□□□□□ -0.18
Clns1aQ61189 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.92□□□□□ -0.18
Clns1aQ61189 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Gm18284-201ENSMUST00000172604 624 ntBASIC13.92□□□□□ -0.18
Clns1aQ61189 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms