Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a4Q5XF90 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a4Q5XF90 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Atp13a4Q5XF90 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atp13a4Q5XF90 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atp13a4Q5XF90 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atp13a4Q5XF90 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atp13a4Q5XF90 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atp13a4Q5XF90 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Atp13a4Q5XF90 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atp13a4Q5XF90 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atp13a4Q5XF90 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Gm10052-201ENSMUST00000168019 960 ntBASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Gm7977-201ENSMUST00000193787 748 ntBASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Gm44430-201ENSMUST00000203376 995 ntBASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Gm7729-201ENSMUST00000050143 801 ntBASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a4Q5XF90 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Gm15794-201ENSMUST00000120182 631 ntBASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Atp13a4Q5XF90 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a4Q5XF90 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Gm45328-201ENSMUST00000210942 917 ntBASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atp13a4Q5XF90 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms