Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Gm18733-201ENSMUST00000173950 856 ntBASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shroom1Q5SX79 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shroom1Q5SX79 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Gm11452-201ENSMUST00000122376 690 ntBASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shroom1Q5SX79 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shroom1Q5SX79 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms