Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 Mzt1-203ENSMUST00000227948 952 ntBASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Ctc1Q5SUQ9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.18■□□□□ 0.34
Ctc1Q5SUQ9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctc1Q5SUQ9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Gm18421-201ENSMUST00000204122 625 ntBASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctc1Q5SUQ9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms