Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Gm24589-201ENSMUST00000116692 94 ntBASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Gm15372-201ENSMUST00000120729 834 ntBASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Gm44454-201ENSMUST00000198541 138 ntBASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps54Q5SPW0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Vps54Q5SPW0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Gm15165-201ENSMUST00000118140 502 ntBASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps54Q5SPW0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Gm27741-201ENSMUST00000185060 237 ntBASIC19.45■□□□□ 0.7
Vps54Q5SPW0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps54Q5SPW0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms