Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Gm8097-201ENSMUST00000117903 829 ntBASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Gm8000-201ENSMUST00000188378 592 ntBASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Gm5364-201ENSMUST00000216789 889 ntBASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-2Q5R1I4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-2Q5R1I4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-2Q5R1I4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-2Q5R1I4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms