Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Gm44549-201ENSMUST00000208351 577 ntBASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-4Q5R1H9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Gm7514-201ENSMUST00000209475 934 ntBASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-4Q5R1H9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Gm11927-201ENSMUST00000118472 759 ntBASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-4Q5R1H9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms