Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm3Q5F4S9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm3Q5F4S9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trpm3Q5F4S9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20.48■□□□□ 0.87
Trpm3Q5F4S9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm3Q5F4S9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm3Q5F4S9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm3Q5F4S9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trpm3Q5F4S9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Gm27397-201ENSMUST00000184997 107 ntBASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Gm37153-201ENSMUST00000193637 231 ntBASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trpm3Q5F4S9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm3Q5F4S9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm3Q5F4S9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trpm3Q5F4S9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm3Q5F4S9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm3Q5F4S9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm3Q5F4S9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm3Q5F4S9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm3Q5F4S9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.46■□□□□ 0.87
Trpm3Q5F4S9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm3Q5F4S9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm3Q5F4S9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trpm3Q5F4S9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trpm3Q5F4S9 Auts2-212ENSMUST00000178555 309 ntBASIC20.45■□□□□ 0.86
Trpm3Q5F4S9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trpm3Q5F4S9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trpm3Q5F4S9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trpm3Q5F4S9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trpm3Q5F4S9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trpm3Q5F4S9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trpm3Q5F4S9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm3Q5F4S9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm3Q5F4S9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trpm3Q5F4S9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trpm3Q5F4S9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms