Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf20Q5DTM8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf20Q5DTM8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf20Q5DTM8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf20Q5DTM8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf20Q5DTM8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf20Q5DTM8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Rnf20Q5DTM8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf20Q5DTM8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf20Q5DTM8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Mir7071-201ENSMUST00000184847 69 ntBASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms