Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Rc3h1Q4VGL6 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.73■□□□□ 0.59
Rc3h1Q4VGL6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rc3h1Q4VGL6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rc3h1Q4VGL6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rc3h1Q4VGL6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Rc3h1Q4VGL6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.73■□□□□ 0.59
Rc3h1Q4VGL6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rc3h1Q4VGL6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rc3h1Q4VGL6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rc3h1Q4VGL6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rc3h1Q4VGL6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rc3h1Q4VGL6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rc3h1Q4VGL6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rc3h1Q4VGL6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rc3h1Q4VGL6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rc3h1Q4VGL6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rc3h1Q4VGL6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rc3h1Q4VGL6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.72■□□□□ 0.59
Rc3h1Q4VGL6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rc3h1Q4VGL6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rc3h1Q4VGL6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Gm25406-201ENSMUST00000157599 105 ntBASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rc3h1Q4VGL6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Gm4459-201ENSMUST00000118750 468 ntBASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Mir6404-201ENSMUST00000183699 94 ntBASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms