Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
R3hdm4Q4VBF2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
R3hdm4Q4VBF2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
R3hdm4Q4VBF2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.52■□□□□ 0.39
R3hdm4Q4VBF2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
R3hdm4Q4VBF2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3hdm4Q4VBF2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
R3hdm4Q4VBF2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.5■□□□□ 0.39
R3hdm4Q4VBF2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.5■□□□□ 0.39
R3hdm4Q4VBF2 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.5■□□□□ 0.39
R3hdm4Q4VBF2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3hdm4Q4VBF2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
R3hdm4Q4VBF2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3hdm4Q4VBF2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
R3hdm4Q4VBF2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3hdm4Q4VBF2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3hdm4Q4VBF2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3hdm4Q4VBF2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
R3hdm4Q4VBF2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
R3hdm4Q4VBF2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Gm9103-201ENSMUST00000119371 405 ntBASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Gm28033-201ENSMUST00000184224 96 ntBASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3hdm4Q4VBF2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Gm18669-201ENSMUST00000216049 778 ntBASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3hdm4Q4VBF2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
R3hdm4Q4VBF2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3hdm4Q4VBF2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
R3hdm4Q4VBF2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
R3hdm4Q4VBF2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3hdm4Q4VBF2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3hdm4Q4VBF2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3hdm4Q4VBF2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3hdm4Q4VBF2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
R3hdm4Q4VBF2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.47■□□□□ 0.39
R3hdm4Q4VBF2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
R3hdm4Q4VBF2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3hdm4Q4VBF2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3hdm4Q4VBF2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
R3hdm4Q4VBF2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms