Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Shank3Q4ACU6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.14■□□□□ 0.81
Shank3Q4ACU6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shank3Q4ACU6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Shank3Q4ACU6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.14■□□□□ 0.81
Shank3Q4ACU6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Shank3Q4ACU6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shank3Q4ACU6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Shank3Q4ACU6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shank3Q4ACU6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Gm17271-201ENSMUST00000165535 355 ntBASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC20.13■□□□□ 0.81
Shank3Q4ACU6 AC158538.2-201ENSMUST00000225455 906 ntBASIC20.13■□□□□ 0.81
Shank3Q4ACU6 Gm5366-201ENSMUST00000215494 1338 ntBASIC20.12■□□□□ 0.81
Shank3Q4ACU6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank3Q4ACU6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank3Q4ACU6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC20.12■□□□□ 0.81
Shank3Q4ACU6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.12■□□□□ 0.81
Shank3Q4ACU6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC20.12■□□□□ 0.81
Shank3Q4ACU6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank3Q4ACU6 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.12■□□□□ 0.81
Shank3Q4ACU6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank3Q4ACU6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Shank3Q4ACU6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank3Q4ACU6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank3Q4ACU6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC20.11■□□□□ 0.81
Shank3Q4ACU6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Shank3Q4ACU6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Shank3Q4ACU6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank3Q4ACU6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank3Q4ACU6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank3Q4ACU6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank3Q4ACU6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank3Q4ACU6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank3Q4ACU6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Shank3Q4ACU6 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.11■□□□□ 0.81
Shank3Q4ACU6 Gm6257-201ENSMUST00000163864 910 ntBASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Mir6990-201ENSMUST00000183724 91 ntBASIC20.1■□□□□ 0.81
Shank3Q4ACU6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank3Q4ACU6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank3Q4ACU6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shank3Q4ACU6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shank3Q4ACU6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shank3Q4ACU6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Shank3Q4ACU6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC20.08■□□□□ 0.81
Shank3Q4ACU6 Gm15358-201ENSMUST00000119249 520 ntBASIC20.08■□□□□ 0.81
Shank3Q4ACU6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Shank3Q4ACU6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shank3Q4ACU6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Shank3Q4ACU6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms