Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim80Q3V061 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim80Q3V061 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim80Q3V061 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim80Q3V061 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim80Q3V061 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.83■□□□□ 0.28
Trim80Q3V061 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim80Q3V061 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim80Q3V061 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim80Q3V061 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.83■□□□□ 0.28
Trim80Q3V061 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim80Q3V061 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim80Q3V061 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim80Q3V061 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim80Q3V061 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim80Q3V061 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim80Q3V061 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim80Q3V061 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trim80Q3V061 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim80Q3V061 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim80Q3V061 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim80Q3V061 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim80Q3V061 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim80Q3V061 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim80Q3V061 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim80Q3V061 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim80Q3V061 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim80Q3V061 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim80Q3V061 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim80Q3V061 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Trim80Q3V061 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trim80Q3V061 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim80Q3V061 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim80Q3V061 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trim80Q3V061 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Trim80Q3V061 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim80Q3V061 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim80Q3V061 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim80Q3V061 Mir6349-201ENSMUST00000184059 97 ntBASIC16.81■□□□□ 0.28
Trim80Q3V061 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim80Q3V061 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim80Q3V061 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim80Q3V061 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim80Q3V061 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim80Q3V061 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim80Q3V061 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim80Q3V061 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim80Q3V061 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim80Q3V061 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim80Q3V061 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim80Q3V061 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim80Q3V061 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.8■□□□□ 0.28
Trim80Q3V061 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim80Q3V061 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim80Q3V061 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.8■□□□□ 0.28
Trim80Q3V061 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.8■□□□□ 0.28
Trim80Q3V061 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim80Q3V061 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim80Q3V061 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.79■□□□□ 0.28
Trim80Q3V061 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.79■□□□□ 0.28
Trim80Q3V061 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim80Q3V061 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.79■□□□□ 0.28
Trim80Q3V061 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim80Q3V061 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.79■□□□□ 0.28
Trim80Q3V061 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms