Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc9Q3V038 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.31■□□□□ 0.36
Ttc9Q3V038 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ttc9Q3V038 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc9Q3V038 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc9Q3V038 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc9Q3V038 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc9Q3V038 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc9Q3V038 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc9Q3V038 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ttc9Q3V038 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ttc9Q3V038 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc9Q3V038 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc9Q3V038 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc9Q3V038 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Gm5264-201ENSMUST00000190584 848 ntBASIC17.3■□□□□ 0.36
Ttc9Q3V038 Gm2756-201ENSMUST00000195851 400 ntBASIC17.3■□□□□ 0.36
Ttc9Q3V038 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.3■□□□□ 0.36
Ttc9Q3V038 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc9Q3V038 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.29■□□□□ 0.36
Ttc9Q3V038 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.28■□□□□ 0.36
Ttc9Q3V038 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.28■□□□□ 0.36
Ttc9Q3V038 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ttc9Q3V038 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Gm10576-201ENSMUST00000191927 825 ntBASIC17.28■□□□□ 0.36
Ttc9Q3V038 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.28■□□□□ 0.36
Ttc9Q3V038 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.28■□□□□ 0.36
Ttc9Q3V038 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc9Q3V038 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc9Q3V038 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ttc9Q3V038 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc9Q3V038 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc9Q3V038 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc9Q3V038 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms