Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SfswapQ3USH5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SfswapQ3USH5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SfswapQ3USH5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SfswapQ3USH5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SfswapQ3USH5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SfswapQ3USH5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SfswapQ3USH5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SfswapQ3USH5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SfswapQ3USH5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SfswapQ3USH5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SfswapQ3USH5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SfswapQ3USH5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SfswapQ3USH5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
SfswapQ3USH5 Gm18733-201ENSMUST00000173950 856 ntBASIC19.31■□□□□ 0.68
SfswapQ3USH5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.31■□□□□ 0.68
SfswapQ3USH5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SfswapQ3USH5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SfswapQ3USH5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SfswapQ3USH5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SfswapQ3USH5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SfswapQ3USH5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SfswapQ3USH5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.3■□□□□ 0.68
SfswapQ3USH5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.3■□□□□ 0.68
SfswapQ3USH5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Gm7862-201ENSMUST00000121461 292 ntBASIC19.3■□□□□ 0.68
SfswapQ3USH5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.3■□□□□ 0.68
SfswapQ3USH5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.3■□□□□ 0.68
SfswapQ3USH5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SfswapQ3USH5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Gm6443-201ENSMUST00000203599 874 ntBASIC19.29■□□□□ 0.68
SfswapQ3USH5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SfswapQ3USH5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SfswapQ3USH5 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.28■□□□□ 0.68
SfswapQ3USH5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.28■□□□□ 0.68
SfswapQ3USH5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SfswapQ3USH5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SfswapQ3USH5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.28■□□□□ 0.68
SfswapQ3USH5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SfswapQ3USH5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.28■□□□□ 0.68
SfswapQ3USH5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.28■□□□□ 0.68
SfswapQ3USH5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SfswapQ3USH5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SfswapQ3USH5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SfswapQ3USH5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SfswapQ3USH5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SfswapQ3USH5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SfswapQ3USH5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SfswapQ3USH5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SfswapQ3USH5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SfswapQ3USH5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SfswapQ3USH5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SfswapQ3USH5 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SfswapQ3USH5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms