Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1brtQ3UNC9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1brtQ3UNC9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1brtQ3UNC9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Cks1brtQ3UNC9 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.77□□□□□ -0.52
Cks1brtQ3UNC9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1brtQ3UNC9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC11.77□□□□□ -0.52
Cks1brtQ3UNC9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1brtQ3UNC9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1brtQ3UNC9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1brtQ3UNC9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Cks1brtQ3UNC9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Gm43060-201ENSMUST00000200621 289 ntBASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 CT010467.1-202ENSMUST00000205406 714 ntBASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1brtQ3UNC9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1brtQ3UNC9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms