Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Col5a2Q3U962 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Col5a2Q3U962 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.18■□□□□ 0.66
Col5a2Q3U962 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col5a2Q3U962 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col5a2Q3U962 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col5a2Q3U962 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col5a2Q3U962 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Gm13365-201ENSMUST00000121188 973 ntBASIC19.17■□□□□ 0.66
Col5a2Q3U962 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.17■□□□□ 0.66
Col5a2Q3U962 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.17■□□□□ 0.66
Col5a2Q3U962 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Gm8344-201ENSMUST00000119813 856 ntBASIC19.16■□□□□ 0.66
Col5a2Q3U962 Gm11745-201ENSMUST00000121669 448 ntBASIC19.16■□□□□ 0.66
Col5a2Q3U962 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Gm43438-201ENSMUST00000198133 379 ntBASIC19.16■□□□□ 0.66
Col5a2Q3U962 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.16■□□□□ 0.66
Col5a2Q3U962 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.16■□□□□ 0.66
Col5a2Q3U962 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col5a2Q3U962 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Col5a2Q3U962 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col5a2Q3U962 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.15■□□□□ 0.66
Col5a2Q3U962 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col5a2Q3U962 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.15■□□□□ 0.66
Col5a2Q3U962 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col5a2Q3U962 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col5a2Q3U962 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Col5a2Q3U962 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col5a2Q3U962 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col5a2Q3U962 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col5a2Q3U962 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.15■□□□□ 0.66
Col5a2Q3U962 Gm25948-201ENSMUST00000175334 112 ntBASIC19.15■□□□□ 0.66
Col5a2Q3U962 Mir6990-201ENSMUST00000183724 91 ntBASIC19.15■□□□□ 0.66
Col5a2Q3U962 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col5a2Q3U962 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col5a2Q3U962 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col5a2Q3U962 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Col5a2Q3U962 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Col5a2Q3U962 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.14■□□□□ 0.66
Col5a2Q3U962 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms