Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp25Q3U435 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp25Q3U435 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp25Q3U435 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp25Q3U435 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp25Q3U435 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.27■□□□□ 0.04
Mmp25Q3U435 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp25Q3U435 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp25Q3U435 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Mmp25Q3U435 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Mmp25Q3U435 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.27■□□□□ 0.04
Mmp25Q3U435 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp25Q3U435 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp25Q3U435 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp25Q3U435 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp25Q3U435 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp25Q3U435 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp25Q3U435 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp25Q3U435 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.26■□□□□ 0.03
Mmp25Q3U435 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.26■□□□□ 0.03
Mmp25Q3U435 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp25Q3U435 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Gm28033-201ENSMUST00000184224 96 ntBASIC15.25■□□□□ 0.03
Mmp25Q3U435 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.25■□□□□ 0.03
Mmp25Q3U435 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp25Q3U435 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Mmp25Q3U435 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.24■□□□□ 0.03
Mmp25Q3U435 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.24■□□□□ 0.03
Mmp25Q3U435 Gm15372-201ENSMUST00000120729 834 ntBASIC15.24■□□□□ 0.03
Mmp25Q3U435 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Gm44454-201ENSMUST00000198541 138 ntBASIC15.24■□□□□ 0.03
Mmp25Q3U435 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.24■□□□□ 0.03
Mmp25Q3U435 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp25Q3U435 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.23■□□□□ 0.03
Mmp25Q3U435 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Gm12895-201ENSMUST00000122214 226 ntBASIC15.23■□□□□ 0.03
Mmp25Q3U435 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Mmp25Q3U435 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms