Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Gm18206-201ENSMUST00000207027 926 ntBASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.27■□□□□ 0.68
Lins1Q3U1D0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Lins1Q3U1D0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Lins1Q3U1D0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.27■□□□□ 0.67
Lins1Q3U1D0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lins1Q3U1D0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Lins1Q3U1D0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Gm25745-201ENSMUST00000174945 133 ntBASIC19.26■□□□□ 0.67
Lins1Q3U1D0 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lins1Q3U1D0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lins1Q3U1D0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Gm1401-201ENSMUST00000122048 772 ntBASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Mir5131-201ENSMUST00000175426 93 ntBASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Gm10060-201ENSMUST00000212002 111 ntBASIC19.24■□□□□ 0.67
Lins1Q3U1D0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lins1Q3U1D0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms