Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Gm16198-201ENSMUST00000118766 670 ntBASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Gm45841-201ENSMUST00000207700 164 ntBASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Gm5035-201ENSMUST00000215581 927 ntBASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Gm12017-201ENSMUST00000122453 1003 ntBASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 AL590614.2-201ENSMUST00000225374 1937 ntBASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Gm16570-201ENSMUST00000161951 436 ntBASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Gm45784-201ENSMUST00000188360 142 ntBASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 AC166341.4-201ENSMUST00000220625 123 ntBASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 AC117588.1-201ENSMUST00000228510 999 ntBASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC8.62□□□□□ -1.03
Ush2AQ2QI47 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Gm12742-201ENSMUST00000117326 410 ntBASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC8.61□□□□□ -1.03
Ush2AQ2QI47 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC8.61□□□□□ -1.03
Ush2AQ2QI47 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 AC162801.1-201ENSMUST00000220612 198 ntBASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Gm22189-201ENSMUST00000103822 86 ntBASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Gm42612-201ENSMUST00000197986 623 ntBASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Gm43170-201ENSMUST00000199827 612 ntBASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms