Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna5Q2MKA5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna5Q2MKA5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Chrna5Q2MKA5 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna5Q2MKA5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna5Q2MKA5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna5Q2MKA5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna5Q2MKA5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna5Q2MKA5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna5Q2MKA5 Gm15920-201ENSMUST00000118998 402 ntBASIC19.23■□□□□ 0.67
Chrna5Q2MKA5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna5Q2MKA5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna5Q2MKA5 Gm17968-201ENSMUST00000194902 784 ntBASIC19.23■□□□□ 0.67
Chrna5Q2MKA5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.23■□□□□ 0.67
Chrna5Q2MKA5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna5Q2MKA5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Chrna5Q2MKA5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Gm14057-201ENSMUST00000120631 482 ntBASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna5Q2MKA5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms