Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.87■□□□□ 0.13
Col9a1Q05722 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.87■□□□□ 0.13
Col9a1Q05722 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col9a1Q05722 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.87■□□□□ 0.13
Col9a1Q05722 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col9a1Q05722 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col9a1Q05722 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col9a1Q05722 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col9a1Q05722 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col9a1Q05722 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col9a1Q05722 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col9a1Q05722 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col9a1Q05722 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col9a1Q05722 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col9a1Q05722 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col9a1Q05722 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Col9a1Q05722 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Col9a1Q05722 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Col9a1Q05722 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.86■□□□□ 0.13
Col9a1Q05722 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col9a1Q05722 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col9a1Q05722 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col9a1Q05722 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm22065-201ENSMUST00000103753 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm22066-201ENSMUST00000103761 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm24932-201ENSMUST00000103763 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm24115-201ENSMUST00000103799 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm22190-201ENSMUST00000103827 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm22191-201ENSMUST00000103831 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm24721-201ENSMUST00000103849 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm28018-201ENSMUST00000103869 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm26399-201ENSMUST00000103937 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.86■□□□□ 0.13
Col9a1Q05722 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm25349-201ENSMUST00000177728 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm23616-201ENSMUST00000177797 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm25871-201ENSMUST00000177816 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm24752-201ENSMUST00000178240 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm24496-201ENSMUST00000178287 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm25649-201ENSMUST00000178476 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm25548-201ENSMUST00000178681 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm23147-201ENSMUST00000178841 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm26095-201ENSMUST00000179270 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm22171-201ENSMUST00000179283 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm23936-201ENSMUST00000179354 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm22619-201ENSMUST00000179516 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm25255-201ENSMUST00000179579 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm24755-201ENSMUST00000179691 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm26506-201ENSMUST00000179692 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm25086-201ENSMUST00000179931 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm23243-201ENSMUST00000180047 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm24659-201ENSMUST00000180212 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm24169-201ENSMUST00000180244 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm23689-201ENSMUST00000180354 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm27359-201ENSMUST00000184153 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm27785-201ENSMUST00000184268 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm27466-201ENSMUST00000184396 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm27703-201ENSMUST00000184836 110 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm17837-201ENSMUST00000186435 985 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col9a1Q05722 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col9a1Q05722 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Col9a1Q05722 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col9a1Q05722 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col9a1Q05722 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.86■□□□□ 0.13
Col9a1Q05722 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Col9a1Q05722 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col9a1Q05722 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col9a1Q05722 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col9a1Q05722 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col9a1Q05722 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col9a1Q05722 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col9a1Q05722 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Col9a1Q05722 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.85■□□□□ 0.13
Col9a1Q05722 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col9a1Q05722 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col9a1Q05722 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.85■□□□□ 0.13
Col9a1Q05722 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.85■□□□□ 0.13
Col9a1Q05722 Gm9257-201ENSMUST00000221254 232 ntBASIC15.85■□□□□ 0.13
Col9a1Q05722 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.85■□□□□ 0.13
Col9a1Q05722 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.85■□□□□ 0.13
Col9a1Q05722 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Col9a1Q05722 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col9a1Q05722 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.85■□□□□ 0.13
Col9a1Q05722 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col9a1Q05722 Gm9519-201ENSMUST00000206108 1337 ntBASIC15.85■□□□□ 0.13
Col9a1Q05722 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.85■□□□□ 0.13
Col9a1Q05722 AC154849.3-201ENSMUST00000223733 1660 ntBASIC15.85■□□□□ 0.13
Col9a1Q05722 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col9a1Q05722 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Col9a1Q05722 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col9a1Q05722 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col9a1Q05722 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col9a1Q05722 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col9a1Q05722 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col9a1Q05722 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms