Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx3-2P97503 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx3-2P97503 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx3-2P97503 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx3-2P97503 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx3-2P97503 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx3-2P97503 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx3-2P97503 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx3-2P97503 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.33■□□□□ 0.04
Nkx3-2P97503 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Nkx3-2P97503 Birc2-201ENSMUST00000054878 378 ntBASIC15.33■□□□□ 0.04
Nkx3-2P97503 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx3-2P97503 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx3-2P97503 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx3-2P97503 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx3-2P97503 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Nkx3-2P97503 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx3-2P97503 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx3-2P97503 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.32■□□□□ 0.04
Nkx3-2P97503 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Gm13312-201ENSMUST00000119631 718 ntBASIC15.32■□□□□ 0.04
Nkx3-2P97503 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.32■□□□□ 0.04
Nkx3-2P97503 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.32■□□□□ 0.04
Nkx3-2P97503 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx3-2P97503 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nkx3-2P97503 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.31■□□□□ 0.04
Nkx3-2P97503 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.31■□□□□ 0.04
Nkx3-2P97503 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx3-2P97503 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nkx3-2P97503 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms