Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc1P97496 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.27■□□□□ 0.84
Smarcc1P97496 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc1P97496 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smarcc1P97496 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smarcc1P97496 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smarcc1P97496 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc1P97496 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc1P97496 Gm15920-201ENSMUST00000118998 402 ntBASIC20.26■□□□□ 0.83
Smarcc1P97496 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Smarcc1P97496 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.26■□□□□ 0.83
Smarcc1P97496 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Smarcc1P97496 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc1P97496 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Smarcc1P97496 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc1P97496 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc1P97496 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc1P97496 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc1P97496 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Smarcc1P97496 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc1P97496 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc1P97496 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc1P97496 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.25■□□□□ 0.83
Smarcc1P97496 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Smarcc1P97496 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc1P97496 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc1P97496 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc1P97496 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Smarcc1P97496 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.25■□□□□ 0.83
Smarcc1P97496 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Smarcc1P97496 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.25■□□□□ 0.83
Smarcc1P97496 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc1P97496 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc1P97496 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.25■□□□□ 0.83
Smarcc1P97496 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc1P97496 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Smarcc1P97496 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc1P97496 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc1P97496 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc1P97496 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.24■□□□□ 0.83
Smarcc1P97496 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc1P97496 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Smarcc1P97496 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc1P97496 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc1P97496 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.24■□□□□ 0.83
Smarcc1P97496 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC20.24■□□□□ 0.83
Smarcc1P97496 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc1P97496 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.24■□□□□ 0.83
Smarcc1P97496 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.24■□□□□ 0.83
Smarcc1P97496 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.24■□□□□ 0.83
Smarcc1P97496 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.24■□□□□ 0.83
Smarcc1P97496 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.24■□□□□ 0.83
Smarcc1P97496 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.24■□□□□ 0.83
Smarcc1P97496 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc1P97496 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc1P97496 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc1P97496 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc1P97496 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc1P97496 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc1P97496 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc1P97496 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc1P97496 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc1P97496 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc1P97496 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc1P97496 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smarcc1P97496 Mir6404-201ENSMUST00000183699 94 ntBASIC20.23■□□□□ 0.83
Smarcc1P97496 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.23■□□□□ 0.83
Smarcc1P97496 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc1P97496 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.23■□□□□ 0.83
Smarcc1P97496 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc1P97496 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc1P97496 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Smarcc1P97496 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smarcc1P97496 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc1P97496 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc1P97496 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc1P97496 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc1P97496 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc1P97496 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc1P97496 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc1P97496 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc1P97496 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.22■□□□□ 0.83
Smarcc1P97496 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc1P97496 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc1P97496 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc1P97496 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc1P97496 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc1P97496 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Smarcc1P97496 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc1P97496 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc1P97496 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc1P97496 Gm14701-201ENSMUST00000117156 348 ntBASIC20.21■□□□□ 0.83
Smarcc1P97496 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.21■□□□□ 0.83
Smarcc1P97496 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.21■□□□□ 0.83
Smarcc1P97496 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.21■□□□□ 0.83
Smarcc1P97496 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcc1P97496 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcc1P97496 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcc1P97496 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcc1P97496 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms