Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps45P97390 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.77■□□□□ 0.28
Vps45P97390 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Vps45P97390 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps45P97390 Gm13884-201ENSMUST00000118103 829 ntBASIC16.77■□□□□ 0.28
Vps45P97390 Olfr129-201ENSMUST00000122318 993 ntBASIC16.77■□□□□ 0.28
Vps45P97390 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps45P97390 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vps45P97390 AW822252-206ENSMUST00000208904 237 ntBASIC16.77■□□□□ 0.28
Vps45P97390 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.77■□□□□ 0.28
Vps45P97390 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps45P97390 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vps45P97390 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.77■□□□□ 0.28
Vps45P97390 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps45P97390 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vps45P97390 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps45P97390 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps45P97390 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Vps45P97390 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Vps45P97390 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps45P97390 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Vps45P97390 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.76■□□□□ 0.27
Vps45P97390 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.76■□□□□ 0.27
Vps45P97390 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.76■□□□□ 0.27
Vps45P97390 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.76■□□□□ 0.27
Vps45P97390 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.76■□□□□ 0.27
Vps45P97390 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Vps45P97390 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.76■□□□□ 0.27
Vps45P97390 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps45P97390 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Vps45P97390 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.75■□□□□ 0.27
Vps45P97390 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.75■□□□□ 0.27
Vps45P97390 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Vps45P97390 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Gm43347-201ENSMUST00000200226 580 ntBASIC16.75■□□□□ 0.27
Vps45P97390 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.75■□□□□ 0.27
Vps45P97390 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Vps45P97390 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.75■□□□□ 0.27
Vps45P97390 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps45P97390 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Vps45P97390 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Vps45P97390 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.74■□□□□ 0.27
Vps45P97390 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.74■□□□□ 0.27
Vps45P97390 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Vps45P97390 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps45P97390 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Vps45P97390 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps45P97390 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms