Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-3P97334 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-3P97334 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.41■□□□□ 0.86
Nkx2-3P97334 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-3P97334 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-3P97334 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Nkx2-3P97334 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-3P97334 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-3P97334 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.4■□□□□ 0.86
Nkx2-3P97334 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-3P97334 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.4■□□□□ 0.86
Nkx2-3P97334 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.4■□□□□ 0.86
Nkx2-3P97334 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.4■□□□□ 0.86
Nkx2-3P97334 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.4■□□□□ 0.86
Nkx2-3P97334 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-3P97334 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-3P97334 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-3P97334 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-3P97334 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-3P97334 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nkx2-3P97334 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nkx2-3P97334 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.39■□□□□ 0.86
Nkx2-3P97334 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nkx2-3P97334 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nkx2-3P97334 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-3P97334 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.39■□□□□ 0.85
Nkx2-3P97334 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.39■□□□□ 0.85
Nkx2-3P97334 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.39■□□□□ 0.85
Nkx2-3P97334 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-3P97334 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.39■□□□□ 0.85
Nkx2-3P97334 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-3P97334 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-3P97334 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-3P97334 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-3P97334 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-3P97334 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Nkx2-3P97334 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-3P97334 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-3P97334 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.38■□□□□ 0.85
Nkx2-3P97334 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Gm4899-201ENSMUST00000178708 719 ntBASIC20.38■□□□□ 0.85
Nkx2-3P97334 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.38■□□□□ 0.85
Nkx2-3P97334 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.38■□□□□ 0.85
Nkx2-3P97334 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-3P97334 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-3P97334 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Gm14822-201ENSMUST00000122247 291 ntBASIC20.37■□□□□ 0.85
Nkx2-3P97334 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.37■□□□□ 0.85
Nkx2-3P97334 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.37■□□□□ 0.85
Nkx2-3P97334 Gm45167-201ENSMUST00000208007 322 ntBASIC20.37■□□□□ 0.85
Nkx2-3P97334 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-3P97334 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-3P97334 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-3P97334 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-3P97334 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Nkx2-3P97334 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Nkx2-3P97334 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Nkx2-3P97334 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.36■□□□□ 0.85
Nkx2-3P97334 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.36■□□□□ 0.85
Nkx2-3P97334 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-3P97334 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-3P97334 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-3P97334 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Nkx2-3P97334 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-3P97334 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms