Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm27680-201ENSMUST00000184192 160 ntBASIC11.07□□□□□ -0.64
PrkdcP97313 Gm38294-201ENSMUST00000192831 381 ntBASIC11.07□□□□□ -0.64
PrkdcP97313 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.07□□□□□ -0.64
PrkdcP97313 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
PrkdcP97313 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Gm43433-201ENSMUST00000196573 481 ntBASIC11.07□□□□□ -0.64
PrkdcP97313 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
PrkdcP97313 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.06□□□□□ -0.64
PrkdcP97313 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Gm15358-201ENSMUST00000119249 520 ntBASIC11.06□□□□□ -0.64
PrkdcP97313 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.06□□□□□ -0.64
PrkdcP97313 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
PrkdcP97313 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
PrkdcP97313 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Gm9385-201ENSMUST00000117563 472 ntBASIC11.06□□□□□ -0.64
PrkdcP97313 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.06□□□□□ -0.64
PrkdcP97313 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.06□□□□□ -0.64
PrkdcP97313 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.06□□□□□ -0.64
PrkdcP97313 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
PrkdcP97313 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
PrkdcP97313 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.06□□□□□ -0.64
PrkdcP97313 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.06□□□□□ -0.64
PrkdcP97313 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.06□□□□□ -0.64
PrkdcP97313 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.06□□□□□ -0.64
PrkdcP97313 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
PrkdcP97313 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.06□□□□□ -0.64
PrkdcP97313 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC11.06□□□□□ -0.64
PrkdcP97313 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PrkdcP97313 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
PrkdcP97313 Gm5953-201ENSMUST00000220644 2616 ntBASIC11.05□□□□□ -0.64
PrkdcP97313 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC11.05□□□□□ -0.64
PrkdcP97313 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.05□□□□□ -0.64
PrkdcP97313 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.05□□□□□ -0.64
PrkdcP97313 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Gm9682-201ENSMUST00000197505 556 ntBASIC11.05□□□□□ -0.64
PrkdcP97313 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.05□□□□□ -0.64
PrkdcP97313 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
PrkdcP97313 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
PrkdcP97313 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.05□□□□□ -0.64
PrkdcP97313 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
PrkdcP97313 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.05□□□□□ -0.64
PrkdcP97313 Gm27430-201ENSMUST00000184585 107 ntBASIC11.05□□□□□ -0.64
PrkdcP97313 Gm44333-201ENSMUST00000197168 107 ntBASIC11.05□□□□□ -0.64
PrkdcP97313 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.05□□□□□ -0.64
PrkdcP97313 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
PrkdcP97313 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PrkdcP97313 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PrkdcP97313 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
PrkdcP97313 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PrkdcP97313 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
PrkdcP97313 Gm13453-201ENSMUST00000118708 357 ntBASIC11.04□□□□□ -0.64
PrkdcP97313 Gm13829-201ENSMUST00000119600 138 ntBASIC11.04□□□□□ -0.64
PrkdcP97313 Mir6404-201ENSMUST00000183699 94 ntBASIC11.04□□□□□ -0.64
PrkdcP97313 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.04□□□□□ -0.64
PrkdcP97313 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PrkdcP97313 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PrkdcP97313 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PrkdcP97313 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC11.04□□□□□ -0.64
PrkdcP97313 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms