Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SgcbP82349 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.49□□□□□ -0.09
SgcbP82349 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.49□□□□□ -0.09
SgcbP82349 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.49□□□□□ -0.09
SgcbP82349 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SgcbP82349 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SgcbP82349 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SgcbP82349 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SgcbP82349 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.49□□□□□ -0.09
SgcbP82349 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
SgcbP82349 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.48□□□□□ -0.09
SgcbP82349 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.48□□□□□ -0.09
SgcbP82349 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.48□□□□□ -0.09
SgcbP82349 Mir3081-201ENSMUST00000175305 84 ntBASIC14.48□□□□□ -0.09
SgcbP82349 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Gm44430-201ENSMUST00000203376 995 ntBASIC14.48□□□□□ -0.09
SgcbP82349 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SgcbP82349 Gm10819-201ENSMUST00000099988 561 ntBASIC14.48□□□□□ -0.09
SgcbP82349 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SgcbP82349 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SgcbP82349 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SgcbP82349 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SgcbP82349 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SgcbP82349 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.47□□□□□ -0.09
SgcbP82349 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.47□□□□□ -0.09
SgcbP82349 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SgcbP82349 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SgcbP82349 Gm15794-201ENSMUST00000120182 631 ntBASIC14.47□□□□□ -0.09
SgcbP82349 Ank2-226ENSMUST00000189368 339 ntBASIC14.47□□□□□ -0.09
SgcbP82349 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.47□□□□□ -0.09
SgcbP82349 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.47□□□□□ -0.09
SgcbP82349 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.47□□□□□ -0.09
SgcbP82349 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
SgcbP82349 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SgcbP82349 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SgcbP82349 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SgcbP82349 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SgcbP82349 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SgcbP82349 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SgcbP82349 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SgcbP82349 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SgcbP82349 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SgcbP82349 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.46□□□□□ -0.09
SgcbP82349 Olfr129-201ENSMUST00000122318 993 ntBASIC14.46□□□□□ -0.09
SgcbP82349 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.46□□□□□ -0.09
SgcbP82349 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.46□□□□□ -0.09
SgcbP82349 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SgcbP82349 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SgcbP82349 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SgcbP82349 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SgcbP82349 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms