Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Ybx1P62960 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.61■□□□□ 0.25
Ybx1P62960 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Gm4459-201ENSMUST00000118750 468 ntBASIC16.61■□□□□ 0.25
Ybx1P62960 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.61■□□□□ 0.25
Ybx1P62960 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.61■□□□□ 0.25
Ybx1P62960 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.61■□□□□ 0.25
Ybx1P62960 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.61■□□□□ 0.25
Ybx1P62960 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.61■□□□□ 0.25
Ybx1P62960 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Ybx1P62960 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ybx1P62960 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.61■□□□□ 0.25
Ybx1P62960 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ybx1P62960 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ybx1P62960 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ybx1P62960 Gm8097-201ENSMUST00000117903 829 ntBASIC16.6■□□□□ 0.25
Ybx1P62960 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ybx1P62960 Gm11780-201ENSMUST00000136880 516 ntBASIC16.6■□□□□ 0.25
Ybx1P62960 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.6■□□□□ 0.25
Ybx1P62960 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.6■□□□□ 0.25
Ybx1P62960 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.6■□□□□ 0.25
Ybx1P62960 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ybx1P62960 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ybx1P62960 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ybx1P62960 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Ybx1P62960 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ybx1P62960 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ybx1P62960 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.59■□□□□ 0.25
Ybx1P62960 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ybx1P62960 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ybx1P62960 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ybx1P62960 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Ybx1P62960 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.59■□□□□ 0.25
Ybx1P62960 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ybx1P62960 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ybx1P62960 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ybx1P62960 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.58■□□□□ 0.24
Ybx1P62960 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.58■□□□□ 0.24
Ybx1P62960 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ybx1P62960 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ybx1P62960 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.58■□□□□ 0.24
Ybx1P62960 Gm6089-201ENSMUST00000197666 938 ntBASIC16.58■□□□□ 0.24
Ybx1P62960 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ybx1P62960 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ybx1P62960 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ybx1P62960 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ybx1P62960 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ybx1P62960 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ybx1P62960 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.58■□□□□ 0.24
Ybx1P62960 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ybx1P62960 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ybx1P62960 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.58■□□□□ 0.24
Ybx1P62960 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ybx1P62960 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ybx1P62960 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ybx1P62960 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms