Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gabra1P62812 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Gabra1P62812 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gabra1P62812 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gabra1P62812 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gabra1P62812 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gabra1P62812 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.73□□□□□ -0.21
Gabra1P62812 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gabra1P62812 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Gabra1P62812 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Gabra1P62812 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Gabra1P62812 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.72□□□□□ -0.21
Gabra1P62812 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Gabra1P62812 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.72□□□□□ -0.21
Gabra1P62812 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.72□□□□□ -0.21
Gabra1P62812 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gabra1P62812 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.71□□□□□ -0.21
Gabra1P62812 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Gabra1P62812 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.71□□□□□ -0.21
Gabra1P62812 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.71□□□□□ -0.21
Gabra1P62812 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Gm5874-201ENSMUST00000096101 508 ntBASIC13.71□□□□□ -0.21
Gabra1P62812 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Gabra1P62812 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gabra1P62812 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Gabra1P62812 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Gabra1P62812 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Gabra1P62812 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Gabra1P62812 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Gabra1P62812 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Gabra1P62812 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Gabra1P62812 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Gabra1P62812 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.71□□□□□ -0.22
Gabra1P62812 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Gabra1P62812 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Gabra1P62812 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Gabra1P62812 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.7□□□□□ -0.22
Gabra1P62812 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 App-207ENSMUST00000227737 2827 ntBASIC13.7□□□□□ -0.22
Gabra1P62812 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.7□□□□□ -0.22
Gabra1P62812 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Gabra1P62812 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Gabra1P62812 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gabra1P62812 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.7□□□□□ -0.22
Gabra1P62812 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms