Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Lsm6P62313 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.26□□□□□ -0.13
Lsm6P62313 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.26□□□□□ -0.13
Lsm6P62313 Gm9013-201ENSMUST00000132939 882 ntBASIC14.26□□□□□ -0.13
Lsm6P62313 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.26□□□□□ -0.13
Lsm6P62313 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.26□□□□□ -0.13
Lsm6P62313 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.26□□□□□ -0.13
Lsm6P62313 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lsm6P62313 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.25□□□□□ -0.13
Lsm6P62313 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Lsm6P62313 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lsm6P62313 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lsm6P62313 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lsm6P62313 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lsm6P62313 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.25□□□□□ -0.13
Lsm6P62313 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lsm6P62313 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.25□□□□□ -0.13
Lsm6P62313 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.25□□□□□ -0.13
Lsm6P62313 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.25□□□□□ -0.13
Lsm6P62313 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Lsm6P62313 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm6P62313 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lsm6P62313 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lsm6P62313 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.24□□□□□ -0.13
Lsm6P62313 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.24□□□□□ -0.13
Lsm6P62313 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.24□□□□□ -0.13
Lsm6P62313 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lsm6P62313 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm6P62313 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.23□□□□□ -0.13
Lsm6P62313 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm6P62313 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm6P62313 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm6P62313 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lsm6P62313 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm6P62313 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.23□□□□□ -0.13
Lsm6P62313 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.23□□□□□ -0.13
Lsm6P62313 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lsm6P62313 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm6P62313 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm6P62313 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lsm6P62313 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lsm6P62313 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm6P62313 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm6P62313 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm6P62313 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Lsm6P62313 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lsm6P62313 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lsm6P62313 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm6P62313 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm6P62313 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm6P62313 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm6P62313 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm6P62313 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm6P62313 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms