Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a1P61620 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.34□□□□□ -0.11
Sec61a1P61620 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Sec61a1P61620 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Sec61a1P61620 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.34□□□□□ -0.11
Sec61a1P61620 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.34□□□□□ -0.11
Sec61a1P61620 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.34□□□□□ -0.11
Sec61a1P61620 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sec61a1P61620 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Sec61a1P61620 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Sec61a1P61620 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.34□□□□□ -0.11
Sec61a1P61620 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a1P61620 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
Sec61a1P61620 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sec61a1P61620 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sec61a1P61620 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sec61a1P61620 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sec61a1P61620 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a1P61620 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a1P61620 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sec61a1P61620 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Sec61a1P61620 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a1P61620 Gm27463-201ENSMUST00000183569 57 ntBASIC14.33□□□□□ -0.12
Sec61a1P61620 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.33□□□□□ -0.12
Sec61a1P61620 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.33□□□□□ -0.12
Sec61a1P61620 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a1P61620 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a1P61620 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sec61a1P61620 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a1P61620 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a1P61620 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a1P61620 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Sec61a1P61620 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.33□□□□□ -0.12
Sec61a1P61620 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a1P61620 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sec61a1P61620 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.32□□□□□ -0.12
Sec61a1P61620 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sec61a1P61620 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.32□□□□□ -0.12
Sec61a1P61620 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.32□□□□□ -0.12
Sec61a1P61620 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sec61a1P61620 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.32□□□□□ -0.12
Sec61a1P61620 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.32□□□□□ -0.12
Sec61a1P61620 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.32□□□□□ -0.12
Sec61a1P61620 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sec61a1P61620 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.32□□□□□ -0.12
Sec61a1P61620 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.32□□□□□ -0.12
Sec61a1P61620 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.32□□□□□ -0.12
Sec61a1P61620 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Sec61a1P61620 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a1P61620 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sec61a1P61620 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Gm7638-201ENSMUST00000121348 967 ntBASIC14.31□□□□□ -0.12
Sec61a1P61620 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.31□□□□□ -0.12
Sec61a1P61620 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sec61a1P61620 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms